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Get started with rmangal9 months ago
Context | The Mangal project | Data structure | Authentication | How to use rmangal | Overall approach | Search functions | Search and list available datasets | Finding a specific network | Search for a specific taxon | Get networks associated with a search_* object | Integrated workflow with rmangal | Batch analysis | Geolocate Mangal networks with sf | Taxonomic analysis | Network analysis with igraph | Network manipulation and visualization with tidygraph and ggraph | Creating a list references for a set of networks | References
Study case: the African bush elephant (Loxodonta africana)5 years ago
Introduction and setup | Retrieve the taxon id | Map the elephant's distribution | Access the legislation status | Access the elephant's Species+ reference data
Bulk analysis with rcites5 years ago
Broad taxon concept queries | Retrieving information for a set of taxon_concept ID | spp_distributions() | spp_cites_legislation() | spp_eu_legislation() | spp_references()
Get started with rcites5 years ago
Set up a connection to the Species+/CITES Checklist API | Get your personal token | Set the token | Use of key features | Retrieve a taxon identifiers with spp_taxonconcept() | Basic calls to spp_taxonconcept() | Object spp_taxonconcept | Custom calls to spp_taxonconcept() | Retrieve a taxon identifiers available data | CITES legislation data | EU legislation data | Distribution data | References